BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E07LP1|AL427775
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 1943 0.0
3x_Contig195 550 e-156
>3x_Contig1247
Length = 7218
Score = 1943 bits (979), Expect = 0.0
Identities = 983/985 (99%)
Strand = Plus / Minus
Query: 1 gatcaaagagctagtctaagccacttgggtggttgcgagcatgcaaaaaccaaggggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3807 gatcaaagagctagtctaagccacttgggtggttgcgagcatgcaaaaaccaaggggaga 3748
Query: 61 aacagatatttgttctcacctaacaatttgaggtttacatacctttgataatcttgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3747 aacagatatttgttctcacctaacaatttgaggtttacatacctttgataatcttgcaga 3688
Query: 121 aaatacaagcagcgtcgtgggcaacagcactcattggtatcggcttattaaacgtttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3687 aaatacaagcagcgtcgtgggcaacagcactcattggtatcggcttattaaacgtttgaa 3628
Query: 181 ttcacacgtatcggtacttattgcaatatttctttcgactgcgaaaatgttggagaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3627 ttcacacgtatcggtacttattgcaatatttctttcgactgcgaaaatgttggagaatct 3568
Query: 241 gcaactaattggagttcagtcttttttcatcattatacatttgtgtattggcccttatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3567 gcaactaattggagttcagtcttttttcatcattatacatttgtgtattggcccttatat 3508
Query: 301 atatgttcttatgatataaaaaaaaaccaagttctagaaaactagaatagttggtgacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3507 atatgttcttatgatataaaaaaaaaccaagttctagaaaactagaatagttggtgacac 3448
Query: 361 gacatgagaatcatgattcggagtggttctcgtactaatgtagggcacgacattccaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3447 gacatgagaatcatgattcggagtggttctcgtactaatgtagggcacgacattccaact 3388
Query: 421 aatgattgtttctggtttaatggtagacaatactagaacctatctttagggtatctgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3387 aatgattgtttctggtttaatggtagacaatactagaacctatctttagggtatctgcct 3328
Query: 481 taattcttttctagatttgctgtatatttgttaattattcttgtccaatttattataatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3327 taattcttttctagatttgctgtatatttgttaattattcttgtccaatttattataatt 3268
Query: 541 gttccagaggtgccctttcaaagtggaaatgttgtaattcctttacaaaagttatatata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 gttccagaggtgccctttcaaagtggaaatgttgtaattcctttacaaaagttatatata 3208
Query: 601 gggattgtgttgggagccgttactattgaacgaatgacacctgagattatmaagcgctac 660
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 3207 gggattgtgttgggagccgttactattgaacgaatgaaacctgagattataaagcgctac 3148
Query: 661 cagagctcagcttaaaacacaaagctttctgacataatcgcttcgatgacgggcatactg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 cagagctcagcttaaaacacaaagctttctgacataatcgcttcgatgacgggcatactg 3088
Query: 721 acggaataagaaccacgtgatattaattgtttcacagatatgctcgaatgaaaaaaaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3087 acggaataagaaccacgtgatattaattgtttcacagatatgctcgaatgaaaaaaaaaa 3028
Query: 781 aaaaaagagaaaagcagagtcatcgaatagctccacgaattaacttgaacattttattgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3027 aaaaaagagaaaagcagagtcatcgaatagctccacgaattaacttgaacattttattgt 2968
Query: 841 ttgagatcatcttgatatatattgagatcctttgtgtacttcatagcttgctgattttat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2967 ttgagatcatcttgatatatattgagatcctttgtgtacttcatagcttgctgattttat 2908
Query: 901 cgcttaagacctgcaggggatatcttcttcggcagattattgatctgatcttaatatctt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2907 cgcttaagacctgcaggggatatcttcttcggcagattattgatctgatcttaatatctt 2848
Query: 961 agttttccttcttcgatatttagaa 985
|||||||||||||||||||||||||
Sbjct: 2847 agttttccttcttcgatatttagaa 2823
>3x_Contig195
Length = 923
Score = 550 bits (277), Expect = e-156
Identities = 277/277 (100%)
Strand = Plus / Plus
Query: 1 gatcaaagagctagtctaagccacttgggtggttgcgagcatgcaaaaaccaaggggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gatcaaagagctagtctaagccacttgggtggttgcgagcatgcaaaaaccaaggggaga 586
Query: 61 aacagatatttgttctcacctaacaatttgaggtttacatacctttgataatcttgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aacagatatttgttctcacctaacaatttgaggtttacatacctttgataatcttgcaga 646
Query: 121 aaatacaagcagcgtcgtgggcaacagcactcattggtatcggcttattaaacgtttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aaatacaagcagcgtcgtgggcaacagcactcattggtatcggcttattaaacgtttgaa 706
Query: 181 ttcacacgtatcggtacttattgcaatatttctttcgactgcgaaaatgttggagaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ttcacacgtatcggtacttattgcaatatttctttcgactgcgaaaatgttggagaatct 766
Query: 241 gcaactaattggagttcagtcttttttcatcattata 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 767 gcaactaattggagttcagtcttttttcatcattata 803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,162
Number of Sequences: 1807
Number of extensions: 19162
Number of successful extensions: 2613
Number of sequences better than 1.0e-20: 2
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)